Cow and Chicken unwittingly create perpetual energy through spilling a junior chemistry set. This leads Rear Admiral Floyd (the Red Guy) to a get-rich scheme.
The family heads over to Oregon to find a tribe of head-hunters. Eventually, Chicken soon becomes the “hunted”, especially when the Red Guy is their leader.
Flem and Earl wake up naked and stranded in a hot ocean. They remember the great moments and dreams they’ve had together, even with help from the Red Guy.
Chicken, Flem and Earl are on their first day of junior high school, where in P.E, they play dodgeball. While they are in the showers, their clothes are stolen.
Using a home-made rocket, Cow travels to a distant planet, where she meets up with the Red Guy, who claims to be an alien. She takes him back to Earth, where he claims that the solution to the world’s problems lies in puppets.
Chicken hosts a magic show in front of his friends and family. It soon becomes no laughing matter when he makes Cow’s udder disappear, which ends up on the Red Guy.
After Cow and Chicken tamper with the school photocopier, The Copy Fairy (the Red Guy) makes an evil version of Chicken through one of his copies. Evil Chicken soon runs rampant and it becomes up to Cow and Chicken to stop him and clear Chicken’s name.
Cow, Chicken, Flem and Earl are all competing in a game show called “You Ben Panced?” hosted by Benjamin Panced (the Red Guy). The challenges are virtually impossible to complete in such a short period of time, resulting in the losers spinning the penalty wheel.
After being sold an invisibility potion by the Red Guy, Cow really believes she is invisible, despite not drinking it. She goes on to cause trouble, in which she, somehow, gets away with.
Chicken’s wish for Cow to shut up comes true. When he is run over by a truck, he regrets it after being sentenced to 50 years in prison for jaywalking (although the truck driver was at fault) when Cow refuses to clear his name.
Mom and Dad are worried about their children when they say they’re not scared of the dark. So, they hire a scared Dr. Laxslax (the Red Guy) to solve the problem.
Cow and Chicken are sent to join the Great Pantzini (the Red Guy’s) circus. He originally has Cow as a trapeze artist, and Chicken as a fire eater, but then settles to have them in as clowns.
Cow and Chicken find a time machine, and decide to travel in time. Things go wrong when the Red Guy shows up in an attempt to change the course of history for the worse.
Cow and Chicken’s anarchic cousin, Sow, comes over for a visit. When she comes over to school, Cow ends up taking the blame for Sow’s misguided actions.
